[ Program Manual | User's Guide | Data Files | Databases ]
ShiftOver moves a file to the right or to the left as many columns as you specify.
What more can we say? You have text that you need to move to the right or left, and we provide the tool to do that. If you don't want to move the whole file, write out the part you want to shift as a temporary file, shift it over, and then include it in the original file.
Here is a session using ShiftOver to move the contents of the file gamma.seq over to the left so that the sequence data starts in the first column:
% shiftover SHIFTOVER what file ? gamma.seq How many columns should "gamma.seq" be shifted (* -4 *) ? -10 What should I call the output file (* gamma.seq *) ? temp.txt 495 lines shifted -10 columns %
Here is part of the output file (notice that the heading has been damaged by the shift):
NCE 1.0 l beta globins G and A gamma Slightom and Smithies, Cell 26; 191-203. y Smithies et al. Cell 26; 345-353. Length: 11375 June 27, 1994 10:09 Type: N Check: 6474 .. GGATCCTAGA TATTCCTTAG TCTGAGGAGG AGCAATTAAG ATTCACTTGT TTAGAGGCTG GGAGTGGTGG CTCACGCCTG TAATCCCAGA ATTTTGGGAG ////////////////////////////////////////////////////// CCAGGAAAGT GACTGCAGGT CACTTTTCCT GGAGCGGGTG AGAGAAAAGT GGAAGTTGCA GTAACTGCCG AATTC
Replace, CompressText, OneCase, ShiftOver, DeTab, ChopUp, LPrint, and ListFile are the GCG file utilities programs.
Unknown.
All parameters for this program may be put on the command line. Use the parameter -CHEck to see the summary below and to have a chance to add things to the command line before the program executes. In the summary below, the capitalized letters in the parameter names are the letters that you must type in order to use the parameter. Square brackets ([ and ]) enclose parameter values that are optional. For more information, see "Using Program Parameters" in Chapter 3, Using Programs in the User's Guide.
Minimal Syntax: % shift [-INfile=]gamma.seq -Default Prompted Parameters: -SHIft=-4 shifts file contents four columns to the left [-OUTfile=]gamma.seq the output file name Local Data Files: None Optional Parameters: None
None.
None.
[ Program Manual | User's Guide | Data Files | Databases ]
Documentation Comments: doc-comments@gcg.com
Technical Support: help@gcg.com
Copyright (c) 1982, 1983, 1985, 1986, 1987, 1989, 1991, 1994, 1995, 1996 Gentics Computer Group, Inc. All rights reserved.
Licenses and Trademarks Wisconsin Package is a trademark of Genetics Computer Group, Inc. GCG and the GCG logo are registered trademarks of Genetics Computer Group, Inc.
All other product names mentioned in this documentation may be trademarks, and if so, are trademarks or registered trademarks of their respective holders and are used in this documentation for identification purposes only.